19–23 Jun 2023
Laboratori Nazionali di Frascati INFN
Europe/Rome timezone

Controlling protein orientation in gas phase using strong electric fields

19 Jun 2023, 15:00
40m
Aula Salvini (Laboratori Nazionali di Frascati INFN)

Aula Salvini

Laboratori Nazionali di Frascati INFN

Via E. Fermi 54 00044 Frascati (RM)

Speaker

Emiliano De Santis

Description

Single particle imaging is a set of emerging techniques that utilize ultrashort and ultraintense X-ray pulses to generate diffraction from single isolated particles in the gas phase to determine their structures. However, one of the main challenges of this approach is the unknown orientation of the individual sample molecules at the time of exposure, which makes structure determination computationally demanding and, in some cases, impossible.
Proteins often have nonzero electric dipole moments, making them interact with external electric fields and offering a means for controlling their orientation. Through classical and ab initio molecular dynamics simulations, we identify a range of electric field strengths that allow for successful orientation of proteins without altering their structure. Additionally, we demonstrate that orientation information is crucial for successful structure determination in various experimentally relevant cases. Our findings suggest that non-destructive field orientation of intact proteins is a viable method that opens up new avenues for structural investigations using single particle imaging.

Primary author

Co-authors

Prof. Carl Caleman (Uppsala University) Prof. Erik Marklund (Uppsala University) Mr Maxim Brodmerkel (Uppsala University)

Presentation materials