NEST GPU Workshop 2024

23 Oct 2024, 09:00 → 25 Oct 2024, 22:30 Europe/Rome

Department of Physics, University of Cagliari

Gianmarco Tiddia (Istituto Nazionale di Fisica Nucleare, Sezione di Cagliari), Johanna Senk (University of Sussex, Brighton), Luca Pontisso (Istituto Nazionale di Fisica Nucleare)

We are happy to invite everyone interested in simulation technology for neuroscience and GPU computing to the NEST GPU Workshop 2024.

The event is an opportunity for people involved in the NEST Initiative and interested in the development of the GPU-based version of the NEST simulator to interact and work towards the alignment of the CPU and GPU-bases simulation codes to better exploit the computing power granted by next-era supercomputers.

The event will take place in Cagliari (Sardinia, Italy) from Wednesday 23/10 to Friday 25/10 and it will be followed by a NEST GPU hackathon from Monday 28/10 to Wednesday 30/10.

 

 

Wednesday 23 October

Welcome and Introduction

Conveners: Bruno Golosio (Istituto Nazionale di Fisica Nucleare), Johanna Senk (University of Sussex, Brighton)

Network construction

Convener: Bruno Golosio (Istituto Nazionale di Fisica Nucleare)

1 Bridging Local and Remote Connectivity: Optimizing MPI-GPU Simulations of Spiking Neural Networks models

Speaker: Bruno Golosio (Istituto Nazionale di Fisica Nucleare)

10:45 Coffee break

Validation and benchmarking

2 The quest for validating and benchmarking NEST GPU

Speaker: Mr Gianmarco Tiddia (Istituto Nazionale di Fisica Nucleare, Sezione di Cagliari)

3 NEST Simulator alignment and HPC centered benchmarking

Speaker: Dennis Terhorst (Forschungszentrum Jülich GmbH)

4 Exabrainprep: Bridging simulations with a common connection pooling implementation

Speaker: Catherine Mia Schoefmann (Jülich Research Center)

Roundtable discussion

12:30 Lunch break

MPI and simulation loop optimization

5 Exploiting network topology in brain-scale multi-area model simulations

Speaker: Susanne Kunkel (PGI-15, Juelich Research Centre)

6 Towards spatially organized networks with NEST GPU

Speaker: Jose Villamar (Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich, Germany)

7 Studies for MPI communication optimizations

Speakers: Dr Francesco Simula (ROMA1), Luca Pontisso (Istituto Nazionale di Fisica Nucleare)

8 Introduction to CINECA and ICSC HPC systems

Speaker: Daniele Di Bari (CINECA)

15:00 Coffee break

Roundtable discussion

15:30 Coffee break

Working groups

Thursday 24 October

NESTML and compartment models

9 Modeling and simulating spiking neurons with NESTML on NEST GPU

Speaker: Pooja Babu (Forschungszentrum Jülich)

10 Learning / sleep with apical mechanisms

Speaker: Pier Stanislao Paolucci (Istituto Nazionale di Fisica Nucleare)

11 Compartmental models in NEST-GPU

Speaker: Willem Wybo (Forschungszentrum Jülich)

12 Simplified neuronal model capturing brain-state specific apical -amplification, -isolation and -drive induced by calcium dynamics

Speaker: Elena Pastorelli (Istituto Nazionale di Fisica Nucleare)

11:00 Coffee break

Roundtable discussion

12:30 Lunch break

13 Seminar

Working groups

Social event: Social dinner

Indications: http://www.agriturismobaccucardu.it/comeraggiungerci_en.html

Friday 25 October

Development of new models

14 New biophysical mechanisms in NEST

Speaker: Markus Diesmann

15 Computational neuroscience: studying structural plasticity mechanisms through firing-rate and spiking models

Speaker: Luca Sergi (Istituto Nazionale di Fisica Nucleare)

16 Full model of the CA1 Human Hippocampus

Speaker: Sergio Solinas (University of Sassari)

10:15 Coffee break

Roundtable discussion

Roadmap refinement and hackathon organization

17 Let's refine the NEST GPU Roadmap

Speaker: Johanna Senk

12:30 Lunch break

Wrap up

Social event: Social trip

Indications: http://www.agriturismobaccucardu.it/comeraggiungerci_en.html